Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015832453.1_cds_XP_016504905.1_18295
CDS Infomation

[gene=LOC107822848] [db_xref=GeneID:107822848] [protein=spermatogenesis-associated protein 20-like isoform X2] [protein_id=XP_016504905.1] [location=complement(join(13622..13807,13895..14071,14164..14367,14435..14659,15041..15151,15224..15487,16450..16691,16774..17014,17439..17595,17725..17873,18223..18255,18353..18421))] [gbkey=CDS]
Sequence

ATGGAAGTTGAATCTTTTGAAGATGAAGAGGTGGCCAAATTGCTAAACGATTGGTTCGTT
AGCATCAAGGTTGATAGAGAGGAGCGTCCAGATGTTGACAAGGTGTACATGACATATGTG
CAAGCTTTATATGGTGGTGGCGGTTGGCCACTAAACGTTTTTCTTTCACCTGATTTGAAG
CCCTTGATGGGTGGGACTTATTTTCCTCCAGAAGACAACTATGGAAGGCCAGGATTTAAA
ACTATACTCAGGAAAGTGACGGAAGCGTGGAACAGCAAGAGAGATATGCTTGTCCAGAGT
GGATCCTTTGCAATAGAACAATTATCAGAGGCAATGGCGGCAGTTGCAACATCAAATAAG
CTTTCAGATGAGGTTCCGGAAACTGCACTGCGTAAATGTGCTGATCATCTAGGAGAAAGC
TACGATTCAAAATATGGTGGTTTTGGTTCTGCACCCAAATTTCCAAGGCCAGTTGAGATG
CAGTTGATGCTTTACAGCTCAAAGAGGTCTGGGGAGACTGGAAAATCAGGTGAAGCCAAG
AATGCTCTAGATATGGTCTTGTTCACTTTAGAATGCATGGCGAGGGGTGGTATCCATGAT
CATGTTGGAGGTGGTTTTCACAGATACAGCGTGGATGAATGCTGGCATGTTCCACATTTC
GAGAAAATGTTATATGATCAGGGTCAACTTTGTAATGTGTATCTCGATGCTTTTTGTATC
ACAAAGGATGTGTTTTATTCAAGTTTGTCTCGTGATATCCTTGACTACTTGAGGAGGGAT
ATGATTGGTCCAAATGGTGAAATATTTTCGGCTGAGGATGCTGATAGTTATGAATCTGAA
GGTGCGTCACGGAAAAAGGAGGGTGCTTTCTATGTCTGGACTAGTACCGAGGTTGACGAC
ATAGTTGGCGAGCATGCAACGCTTGTCAAGGATCACTATTATGTGAAACCCTCAGGTAAC
TGTGATCTTTCAAGGAGGAGTGATCCACATAATGAATTCAAGGGCAAAAACGTGCTAATA
GAAAGAAGTAGTACCTCTGCGATGGCATCAAAACATGCTTCGCCTGTCGAGCAGTATCTT
GATATCCTGGGGAACGCTCGGCAGAGACTCTTTGACGTGCGGTCGGAACGTCCCCGACCA
CATCTGGATGATAAGGTTATTGTATCATGGAATGGCCTAGTGATTTCATCTCTTGCTAGA
GCGTCAAAAATTCTCAAGGGAGAACCGGAGGGAACAAGGTTCTACTTCCCTGTGACAGGC
ACCAATCCCAAGGAGTACATGGATGTCGCTGAGAAAGCAGCATATTTTATCAGGAATAAC
CTTTATAATCAACAGACACGCAGGCTGCAGCATAGCTTTAGGAATGGTCCTTCCAAAGCA
CCTGGATTTCTAGATGATTATGCATTTCTGATATCAGGTCTACTGGATCTTTACGAGTTC
GGTGGTTCAGTCTTCTGGTTGGGTTGGGCACTCGAACTTCAGGAGACCCAAGATGAGTTA
TTTCTCGACAAAGCTGGAGGAGGTTACTTCAGCACAACTGGTGAAGATCCTTCTGTTCTT
CTTCGTACGAAAGAAGATCATGATGCAGCGGAGCCTTCAGGGAATTCTGTTTCAGTGATT
AATCTAGTGAGATTGGCCTCTATGGTTGCTGGTGACAAATCCAAACATTACAGAGAGACT
GCAGAACATGTTCTGGCGGTTTTCGAGAAGAGGTTGAAAGATGCAGCTGTCGCTGTGCCA
CTGATGTGCTGTGCAGCAGACATGCTGGCTTTTCCTGCTAGAAAGCAGGTAGTTTTAGTT
GGAGTGAAATCATCTGAGGAGTTCGAAAACATGGTTGCTGCTGCTCATGCAGCATACGAT
CTTAACAAGACGGTTGTTCACATCGATCCAACCGATGCGGAGGAGATGAGATTTTGGGAA
GAAACTAACGGAAATATTGCTTTGATGGCGAAAAACAATGCTGCTGCTGACAAACTAATT
GCCCTTGTTTGTCAAAACTTCACATGTAGCCCTCCAGTCAGTGACCCGAAATCTCTTGAA
TCATTGCTCTCCCAGTAA

Peptide Sequence

PEP ID

XP_016504905.1
PEP Infomation

PREDICTED: spermatogenesis-associated protein 20-like isoform X2 [Nicotiana tabacum]
Sequence

MEVESFEDEEVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLNVFLSPDLK
PLMGGTYFPPEDNYGRPGFKTILRKVTEAWNSKRDMLVQSGSFAIEQLSEAMAAVATSNK
LSDEVPETALRKCADHLGESYDSKYGGFGSAPKFPRPVEMQLMLYSSKRSGETGKSGEAK
NALDMVLFTLECMARGGIHDHVGGGFHRYSVDECWHVPHFEKMLYDQGQLCNVYLDAFCI
TKDVFYSSLSRDILDYLRRDMIGPNGEIFSAEDADSYESEGASRKKEGAFYVWTSTEVDD
IVGEHATLVKDHYYVKPSGNCDLSRRSDPHNEFKGKNVLIERSSTSAMASKHASPVEQYL
DILGNARQRLFDVRSERPRPHLDDKVIVSWNGLVISSLARASKILKGEPEGTRFYFPVTG
TNPKEYMDVAEKAAYFIRNNLYNQQTRRLQHSFRNGPSKAPGFLDDYAFLISGLLDLYEF
GGSVFWLGWALELQETQDELFLDKAGGGYFSTTGEDPSVLLRTKEDHDAAEPSGNSVSVI
NLVRLASMVAGDKSKHYRETAEHVLAVFEKRLKDAAVAVPLMCCAADMLAFPARKQVVLV
GVKSSEEFENMVAAAHAAYDLNKTVVHIDPTDAEEMRFWEETNGNIALMAKNNAAADKLI
ALVCQNFTCSPPVSDPKSLESLLSQ

Transcript Sequence

Gene sequence data has not been registered.